Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944533.1_cds_XP_016487313.1_78059
CDS Infomation

[gene=LOC107807449] [db_xref=GeneID:107807449] [protein=scarecrow-like protein 22] [protein_id=XP_016487313.1] [location=11261..13405] [gbkey=CDS]
Sequence

ATGATTGTAATACCTCAAAGTAACAACCTAGCAGTAGCAAAAGGAGTACTTGGTGTTTCA
AGTTATGTACCTTCAATTTCTTCTTCAACAGAAGCACCAATTTGCAATAAAGGTTTAACC
TTTACAAGAAATGAATCTGTCTCAGTGTTGGATACAAGAAGTCCTAGTCCTTCAGCTTCA
TCTTCCTCATGCTCTTATGGTGGCCAACATGCTGGAAATAATGGAGTTCCCGGCGCCGGA
GCTGGAAAAATTGACGGCCGGAAAGAGGAGTTGGTGACTGAGCTGCAGCCATTTTCATTT
GGGTTGGAGCCAGAAAAATTTAATCTTGGATTTGGGGATTTGGATAATTTGTTGCCGGAA
CTTGCCGGCTCCGACCAGACCATTTTTCGGTGGATCTCCGGCGATATGGAGGACCCATCA
GTCAGCTTGAAACAATTACTCCAAGGAGGAAATGCAAATGCTGATTTGGGTGGTGGAGTT
TCAGTGGCAGGTTCTTTTGCTTGTACTGATAATATTTCCTTTTCTAGTTCAGATATTTCT
TTAGATGCCAACATTGAGAAAATTGGTTATGCTGTCATAGACTCAAACAACAGACCAAAT
AATAACTTTGAAAATCTGAATGCCAATCTTTTGGCCAAGAGTTTACCCCCTGCTTTGAGC
TTTCAAGAACAACAATCAGAAGAGAAGCCTCAAATTTCTTGTCCACAAATAGTGGCAAAC
CAAACCCAGTTCCAGAATTCCGCTTATGTTAACTTGTTTGGCTCATCATCATACAACATG
AATCAAGAACAGCCGCCACCCAAGCGCCACAATTCGGGTATCCTGGGTTCAAGCTTAGGC
TTTCTATTGCCTAAAGTTCCGTTCTTTAGTCCCAGTGGTGACTTATTGCTGAGGAAACAA
CCATTGGGACAAATGCAGCAACAAGTCAATTTGCTGCCTCCTCACCAGTTTCAGCCAACG
CCATTATTTGTACCTAAGCTTGAGGCAGCTGGTGGTGGTGGTAATGGTAATTTGGTGGTG
CCTCGTCATCAACAGCAGGAACAACAGTTCATTTATGACCAGATTTTTCAGGCCTCTGAA
TTATTACTGGCCGGACATTTCTCAAACGCGCAAATGATATTGGCGCGGCTCAATCAACAG
CTCTCTCCCATTGGCAAACCCTTCAAGAGGGCTGCTTTTTACTTCAAAGAGGCTCTGCAG
TTACCTTTCCTTTTGCCTTGTACATCCACATCTTTTCCACCAAGAATTCCCACCCCATTT
GATTGTGTGCTTAAGATGGATGCTTATAAGGCTTTTTCTGAAGTATCTCCACTTATTCAG
TTCATGAATTTCACCTCCAATCAAGCTATTCTTGAAGCTCTTGGGGCTGCCAAGCAAATT
CACATAATAGATTTTGACATTGGCTGTGGTGCTCAATGGTCCTCATTAATGCAAGAACTC
CCGAGCAGCAATAGAAAGGCAACTTCCCTAAAGATTACTGCCTTTGTATCTCCTTCAACC
CACCACTCCGTTGAGATTGGCATCATGCACGAAAGTTTAACGCTGTTTGCTAATGATGTG
GGAATCAGATTTGAGCTGGAAGTTATTAACTTGGATTCCTTTGACCCTAAGACTTATCCC
TTATCCTCCTTGAGGTCATCTGAGTGTGAGGCTATTGCTATTAATTTCCCCATATGGTCT
ATTTCAAGTTGTCTATTTGCATTTCCTTCACTGCTTCACTGCATGAAGCAACTTTCACCA
AAAGTTGTTGTATCATTGGAACGTGGATGCGAACGTACTGAACTCCCCTTAAAGCATCAC
CTCCTCCACGCCCTCCAATATTATGAGATACTTTTAGCCAGTATTGATGCTGCTAATTTA
ACACCAGATGTTGGGAAAAAAATTGAGAGGTCTCTCTTCCAGTCTAGCATTGAGAACATG
GTCTTAGGGCGCCTCCGATCCCCTGACCGAATTCCCCCATGGAGAAACCTATTTGCTTCT
GCAGGATTTTCACCTGTTGCGTTTAGTAATCTAACTGAAATCCAGGCAGAATGCCTTGTT
AAGAGAACTCAGGTAGGAGGATTTCATGTCGAGAAGCGCCAGTCGTCTCTTGTGCTATGC
TGGAAGCAGCGGGAACTCTTGTCAGCTTTGTCTTGGAGGTGCTGA

Peptide Sequence

PEP ID

XP_016487313.1
PEP Infomation

PREDICTED: scarecrow-like protein 22 [Nicotiana tabacum]
Sequence

MIVIPQSNNLAVAKGVLGVSSYVPSISSSTEAPICNKGLTFTRNESVSVLDTRSPSPSAS
SSSCSYGGQHAGNNGVPGAGAGKIDGRKEELVTELQPFSFGLEPEKFNLGFGDLDNLLPE
LAGSDQTIFRWISGDMEDPSVSLKQLLQGGNANADLGGGVSVAGSFACTDNISFSSSDIS
LDANIEKIGYAVIDSNNRPNNNFENLNANLLAKSLPPALSFQEQQSEEKPQISCPQIVAN
QTQFQNSAYVNLFGSSSYNMNQEQPPPKRHNSGILGSSLGFLLPKVPFFSPSGDLLLRKQ
PLGQMQQQVNLLPPHQFQPTPLFVPKLEAAGGGGNGNLVVPRHQQQEQQFIYDQIFQASE
LLLAGHFSNAQMILARLNQQLSPIGKPFKRAAFYFKEALQLPFLLPCTSTSFPPRIPTPF
DCVLKMDAYKAFSEVSPLIQFMNFTSNQAILEALGAAKQIHIIDFDIGCGAQWSSLMQEL
PSSNRKATSLKITAFVSPSTHHSVEIGIMHESLTLFANDVGIRFELEVINLDSFDPKTYP
LSSLRSSECEAIAINFPIWSISSCLFAFPSLLHCMKQLSPKVVVSLERGCERTELPLKHH
LLHALQYYEILLASIDAANLTPDVGKKIERSLFQSSIENMVLGRLRSPDRIPPWRNLFAS
AGFSPVAFSNLTEIQAECLVKRTQVGGFHVEKRQSSLVLCWKQRELLSALSWRC

Transcript Sequence

Gene sequence data has not been registered.